VARNA: Visualization Applet for RNA

This user manual can be browsed in one of the following ways:

• Mouse: Describes basic mouse interactions under various platforms.
• Popup menu hierarchy: Describes those features available from the pop-up menu.
• How to...: A list of operations linked to a description of how to perform them in VARNA.
• Command-line version: Explains how to use VARNA in a non-interactive way through a command-line version. Potentially useful for batch jobs.
• Features description: List of all features offered by the VARNA Applet/Panel, along with a description of how to trigger them.