-
_RNA
fr.orsay.lri.varna.models.rna.RNA _RNA
-
_debug
boolean _debug
-
_conf
fr.orsay.lri.varna.models.VARNAConfig _conf
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_VARNAListeners
ArrayList<E> _VARNAListeners
-
_selectionListeners
ArrayList<E> _selectionListeners
-
_RNAListeners
ArrayList<E> _RNAListeners
-
_basesListeners
ArrayList<E> _basesListeners
-
_manager
UndoManager _manager
-
_realCoords
Point2D.Double[] _realCoords
-
_realCenters
Point2D.Double[] _realCenters
-
_scaleFactor
double _scaleFactor
-
_offsetPanel
Point2D.Double _offsetPanel
-
_offsetRNA
Point2D.Double _offsetRNA
-
_offX
double _offX
-
_offY
double _offY
-
_blink
fr.orsay.lri.varna.controlers.ControleurBlinkingThread _blink
-
_selectedBases
fr.orsay.lri.varna.models.BaseList _selectedBases
-
_backupSelection
ArrayList<E> _backupSelection
-
_nearestBase
Integer _nearestBase
-
_lastSelectedCoord
Point2D.Double _lastSelectedCoord
-
_linkOrigin
Point2D.Double _linkOrigin
-
_linkDestination
Point2D.Double _linkDestination
-
_selectionRectangle
Rectangle _selectionRectangle
-
_highlightAnnotation
boolean _highlightAnnotation
-
_titleHeight
int _titleHeight
-
_border
Dimension _border
-
_drawBBox
boolean _drawBBox
-
_drawBorder
boolean _drawBorder
-
_translation
Point _translation
-
_horsCadre
boolean _horsCadre
-
_premierAffichage
boolean _premierAffichage
-
_interpolator
fr.orsay.lri.varna.controlers.ControleurInterpolator _interpolator
-
_popup
fr.orsay.lri.varna.views.VueMenu _popup
If comparison mode is TRUE (ON), then the application will be used to
display a super-structure resulting on an RNA secondary structure
comparison. Else, the application is used by default.
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_UI
fr.orsay.lri.varna.views.VueUI _UI
-
_selectedAnnotation
fr.orsay.lri.varna.models.annotations.TextAnnotation _selectedAnnotation
-
_target
Point2D.Double _target
-
_target2
Point2D.Double _target2
-
_hoveredBase
fr.orsay.lri.varna.models.rna.ModeleBase _hoveredBase